Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus champanellensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus champanellensis 18P13 = JCM 17042
Accession NumberNC_021039.1
Gene Summary
Adenine Count
585343 bp
Thymine Count
584638 bp
Guanine Count
693827 bp
Cytosine Count
649573 bp
Genome Length
2573208 bp
Protein-coding Genes
2325 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | RUM_RS09500 | B9E1I9 | + | 2066020 - 2066943 | 33559.4 |
| ump kinase | RUM_RS09505 | Q0SSC2 | + | 2067107 - 2067817 | 25964.5 |
| ribosome recycling factor | RUM_RS09510 | B9MKP8 | + | 2067820 - 2068374 | 20746.1 |
| polyprenyl diphosphate synthase | RUM_RS09515 | Q8XJQ9 | + | 2068408 - 2069148 | 28532.3 |
| phosphatidate cytidylyltransferase | RUM_RS09520 | O31752 | + | 2069150 - 2069983 | 30038.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | RUM_RS09525 | Q6AP35 | + | 2070060 - 2071202 | 41497.2 |
| rip metalloprotease | RUM_RS09530 | Q97I57 | + | 2071266 - 2072306 | 37699.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | RUM_RS09535 | P58667 | + | 2072322 - 2073359 | 37055.5 |
| polc-type dna polymerase iii | RUM_RS09540 | Q895K2 | + | 2073369 - 2077703 | 160682.0 |
| atp phosphoribosyltransferase regulatory subunit | RUM_RS09545 | A5N7Q4 | + | 2077784 - 2078983 | 44773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
