Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus champanellensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus champanellensis 18P13 = JCM 17042
Accession NumberNC_021039.1
Gene Summary
Adenine Count
585343 bp
Thymine Count
584638 bp
Guanine Count
693827 bp
Cytosine Count
649573 bp
Genome Length
2573208 bp
Protein-coding Genes
2325 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | RUM_RS09110 | Q57G26 | + | 1989881 - 1990606 | 27268.3 |
| holliday junction resolvase ruvx | RUM_RS09115 | A9KKS6 | + | 1990603 - 1991025 | 15378.5 |
| hypothetical protein | RUM_RS12705 | Not Available | - | 1991018 - 1991191 | 6036.63 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | RUM_RS09120 | P69001 | + | 1991466 - 1991984 | 19846.5 |
| degv family protein | RUM_RS09125 | Q97IL6 | + | 1991986 - 1992867 | 32627.1 |
| dockerin type i domain-containing protein | RUM_RS12200 | Not Available | + | 1992890 - 1994398 | 56475.5 |
| phosphoglycerate kinase | RUM_RS09135 | A0PYP1 | + | 1994613 - 1995833 | 42851.8 |
| triose-phosphate isomerase | RUM_RS09140 | A3DBQ1 | + | 1995876 - 1996643 | 27268.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | RUM_RS09145 | A3DBQ2 | + | 1996696 - 1998213 | 54865.2 |
| zinc ribbon domain-containing protein | RUM_RS09150 | Not Available | + | 1998380 - 1999738 | 48831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
