Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus champanellensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus champanellensis 18P13 = JCM 17042
Accession NumberNC_021039.1
Gene Summary
Adenine Count
585343 bp
Thymine Count
584638 bp
Guanine Count
693827 bp
Cytosine Count
649573 bp
Genome Length
2573208 bp
Protein-coding Genes
2325 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | RUM_RS04855 | Not Available | + | 1098404 - 1098679 | 9837.02 |
| rna-binding s4 domain-containing protein | RUM_RS04860 | P64405 | + | 1098744 - 1098989 | 9111.11 |
| gh1 family beta-glucosidase | RUM_RS04865 | Q08638 | - | 1099050 - 1100384 | 50585.8 |
| excinuclease abc subunit uvra | RUM_RS04870 | O34863 | - | 1100477 - 1103302 | 103650.0 |
| excinuclease abc subunit uvrb | RUM_RS04875 | Q72XV1 | - | 1103373 - 1105343 | 74621.3 |
| radc family protein | RUM_RS04880 | A6U9H4 | - | 1105355 - 1106056 | 26064.5 |
| polysaccharide biosynthesis tyrosine autokinase | RUM_RS04885 | P58764 | + | 1106276 - 1107775 | 54513.7 |
| cpsb/capc family capsule biosynthesis tyrosine phosphatase | RUM_RS04890 | Not Available | + | 1107769 - 1108467 | 26596.1 |
| dockerin type i domain-containing protein | RUM_RS04895 | Not Available | + | 1108580 - 1110952 | 86058.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | RUM_RS04905 | Q97MN6 | + | 1111456 - 1113294 | 67541.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
