Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradative operon repressor | APY03_7825 | P62573 | + | 8102879 - 8103331 | 17312.2 |
| 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase | APY03_7826 | Not Available | + | 8103328 - 8104011 | 24182.0 |
| 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase | APY03_7827 | Q9RPU5 | + | 8104266 - 8104793 | 19511.3 |
| putative exported protein | APY03_7828 | Not Available | + | 8104833 - 8105810 | 34326.7 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | APY03_7829 | P42269 | + | 8105822 - 8107279 | 51964.4 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | APY03_7830 | Q05353 | + | 8107282 - 8108157 | 32496.6 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | APY03_7831 | Not Available | + | 8108169 - 8108573 | 14572.6 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | APY03_7832 | Not Available | + | 8108575 - 8109378 | 29234.1 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | APY03_7833 | Not Available | + | 8109391 - 8110200 | 28093.6 |
| dihydroxy-acid dehydratase | APY03_7834 | Q7WJP7 | + | 8110208 - 8111929 | 60222.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.