Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_7735 | A8AHD3 | - | 8008057 - 8008653 | 21332.3 |
| putative exported protein | APY03_7736 | Not Available | - | 8008653 - 8009612 | 33230.9 |
| abc-type phosphate/phosphonate transport system periplasmic component-like protein | APY03_7737 | Not Available | - | 8009612 - 8010394 | 28209.7 |
| ornithine cyclodeaminase | APY03_7738 | O28608 | - | 8010423 - 8011424 | 36846.5 |
| urocanate hydratase | APY03_7739 | Q8XW28 | - | 8011435 - 8013156 | 62656.7 |
| histidine ammonia-lyase | APY03_7740 | A1TRE4 | - | 8013187 - 8014803 | 54887.4 |
| histidine utilization repressor | APY03_7741 | Q9HU78 | - | 8014866 - 8015651 | 29121.8 |
| abc transporter atp-binding protein with unknown substrate | APY03_7742 | Q57855 | - | 8015663 - 8016445 | 29088.0 |
| binding-protein-dependent transport systems inner membrane component | APY03_7743 | Not Available | - | 8016445 - 8017302 | 30306.8 |
| abc transporter substrate-binding protein | APY03_7744 | Not Available | - | 8017336 - 8018301 | 34057.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.