Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 7609316 - 7609406 | Not Available |
| putative stomatin/prohibitin-family membrane protease subunit ybbk | APY03_7364 | Q99JB2 | - | 7609443 - 7610372 | 33712.7 |
| putative activity regulator of membrane protease ybbk | APY03_7365 | Not Available | - | 7610409 - 7610834 | 14678.9 |
| arginine decarboxylase | APY03_7366 | Q9I2S7 | + | 7610952 - 7613246 | 85887.5 |
| beta-ig-h3/fasciclin | APY03_7367 | P74615 | + | 7613342 - 7613899 | 18566.6 |
| atp-dependent dna ligase | APY03_7368 | P44121 | - | 7613912 - 7614781 | 32048.7 |
| enoyl-[acyl-carrier-protein] reductase | APY03_7369 | Q9K151 | - | 7614857 - 7615639 | 27557.0 |
| abc transporter, periplasmic substrate-binding protein | APY03_7370 | Q8YC41 | + | 7615638 - 7617473 | 68494.4 |
| oligopeptide transport system permease protein oppb | APY03_7371 | P0AFU1 | + | 7617481 - 7618515 | 38291.6 |
| oligopeptide transport system permease protein oppc | APY03_7372 | P33915 | + | 7618508 - 7619548 | 38392.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.