Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-n(5)-glutamine methyltransferase prmb, methylates lsu ribosomal protein l3p | APY03_7344 | Q7VXJ6 | - | 7588404 - 7589273 | 31118.3 |
| n-succinyl-l,l-diaminopimelate desuccinylase | APY03_7345 | C5CLT2 | - | 7589293 - 7590474 | 42107.0 |
| twitching motility protein pilt | APY03_7346 | Not Available | - | 7590648 - 7591796 | 42037.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | APY03_7347 | C5CLT4 | - | 7591841 - 7592665 | 29401.2 |
| n-succinyl-l,l-diaminopimelate aminotransferase alternative | APY03_7348 | B8DJJ6 | - | 7592662 - 7593873 | 43695.1 |
| n-acetylglutamate synthase | APY03_7349 | Q8XZZ5 | - | 7593885 - 7595231 | 49232.3 |
| pilt protein, n-terminal | APY03_7350 | Not Available | - | 7595256 - 7595675 | 15383.2 |
| hypothetical protein | APY03_7351 | Not Available | - | 7595675 - 7595917 | 8832.27 |
| macromolecule metabolism protein | APY03_7352 | P43329 | + | 7595991 - 7599896 | 145291.0 |
| hypothetical protein | APY03_7353 | Not Available | - | 7599984 - 7600142 | 5507.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.