Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport atp-binding protein livf | APY03_7205 | Q5JEB0 | + | 7449629 - 7450342 | 25337.9 |
| formyl-coa transferase | APY03_7206 | G0HQ31 | + | 7450354 - 7451571 | 44259.9 |
| enoyl-coa hydratase | APY03_7207 | G4V4T7 | + | 7451571 - 7452341 | 27489.2 |
| hydroxymethylglutaryl-coa reductase | APY03_7208 | P13702 | + | 7452404 - 7453699 | 45497.2 |
| ribose abc transport system, permease protein rbsc | APY03_7209 | P0AGI3 | + | 7453739 - 7454797 | 36748.1 |
| ribose abc transporter, periplasmic ribose-binding protein rbsb | APY03_7210 | Not Available | + | 7454865 - 7455842 | 34558.3 |
| ribose abc transport system, permease protein rbsc | APY03_7211 | Q9SD07 | + | 7455915 - 7458038 | 76635.5 |
| hypothetical protein | APY03_7212 | Not Available | + | 7458035 - 7459195 | 41232.5 |
| abc transporter atp-binding protein | APY03_7213 | Q4KDI2 | + | 7459200 - 7460696 | 54868.4 |
| lysr-family transcriptional regulator | APY03_7214 | Not Available | - | 7460755 - 7461663 | 33409.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.