Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-enolpyruvylshikimate-3-phosphate synthase | APY03_7176 | B3R368 | - | 7416105 - 7418099 | 71362.3 |
| cyclohexadienyl dehydrogenase | APY03_7177 | P20692 | - | 7418102 - 7418980 | 30727.1 |
| chorismate mutase i | APY03_7178 | Q9HZ67 | - | 7418991 - 7420109 | 40401.2 |
| phosphoserine aminotransferase | APY03_7179 | A9BM04 | - | 7420134 - 7421255 | 40505.3 |
| hypothetical protein | APY03_7180 | Not Available | - | 7421252 - 7421827 | 20616.0 |
| dna gyrase subunit a | APY03_7181 | P37411 | - | 7421824 - 7424478 | 98230.4 |
| outer membrane protein a precursor | APY03_7182 | Q05146 | + | 7424704 - 7425363 | 23324.8 |
| 3-demethylubiquinone-9 3-methyltransferase | APY03_7183 | Q21UL3 | + | 7425477 - 7426199 | 26503.0 |
| hypothetical protein | APY03_7184 | Q9HZ62 | + | 7426196 - 7426864 | 23778.6 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | + | 7426877 - 7427262 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.