Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate abc transporter, atp-binding protein ugpc | APY03_6814 | Q62GB4 | + | 7043788 - 7044864 | 38076.2 |
| glycerol-3-phosphate abc transporter, atp-binding protein ugpc | APY03_6815 | P10907 | + | 7044867 - 7045937 | 38897.1 |
| glycerol-3-phosphate abc transporter, permease protein ugpa | APY03_6816 | Not Available | + | 7045934 - 7046824 | 33134.1 |
| glycerol-3-phosphate abc transporter, permease protein ugpe | APY03_6817 | Q9Z3R7 | + | 7046907 - 7047722 | 30840.2 |
| putative integral membrane protein | APY03_6818 | Not Available | + | 7047735 - 7048043 | 11622.8 |
| 8-amino-7-oxononanoate synthase | APY03_6819 | Q1LS75 | - | 7048222 - 7049454 | 43219.4 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | APY03_6820 | Q9ZKM5 | - | 7049438 - 7049908 | 17362.7 |
| putative transmembrane protein | APY03_6821 | Not Available | - | 7051043 - 7051705 | 23304.8 |
| methylglutaconyl-coa hydratase | APY03_6822 | C5NN19 | - | 7051719 - 7052507 | 28159.8 |
| dinb family protein | APY03_6823 | Not Available | - | 7052504 - 7053013 | 19225.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.