Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rhlr | APY03_6734 | Not Available | - | 6949890 - 6950684 | 29082.1 |
| phosphoglycolate phosphatase | APY03_6735 | Q3SGR5 | + | 6950699 - 6951403 | 25133.3 |
| opine dehydrogenase | APY03_6736 | Not Available | + | 6951500 - 6952573 | 38522.1 |
| 3-hydroxybutyryl-coa dehydrogenase | APY03_6737 | P45856 | + | 6952563 - 6953567 | 36090.6 |
| 2-hydroxymuconic semialdehyde hydrolase | APY03_6738 | Not Available | + | 6953564 - 6954367 | 29065.9 |
| hypothetical protein | APY03_6739 | Not Available | + | 6955138 - 6955275 | 4908.09 |
| pseudouridine 5'-phosphate glycosidase | APY03_6740 | Q46PS3 | + | 6955358 - 6956284 | 31826.4 |
| homoprotocatechuate degradative operon repressor | APY03_6741 | Not Available | - | 6956289 - 6956759 | 17630.3 |
| indolepyruvate oxidoreductase subunit iora | APY03_6742 | O07835 | + | 6956927 - 6959110 | 78385.0 |
| Trna-trp | Not Available | Not Available | + | 6960146 - 6960221 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.