Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccda | APY03_6624 | Not Available | - | 6829307 - 6830002 | 24350.9 |
| thioredoxin/glutaredoxin | APY03_6625 | Not Available | - | 6830004 - 6830264 | 9106.11 |
| transcriptional regulator, merr family | APY03_6626 | P22896 | - | 6830261 - 6830707 | 16125.5 |
| hypothetical protein | APY03_6627 | Not Available | - | 6832001 - 6832327 | 11358.2 |
| hypothetical protein | APY03_6628 | Not Available | - | 6832633 - 6832926 | 10141.9 |
| heavy metal transport/detoxification protein | APY03_6629 | Not Available | - | 6833141 - 6833332 | 6683.96 |
| lead, cadmium, zinc and mercury transporting atpase | APY03_6630 | Not Available | + | 6833649 - 6835955 | 80081.3 |
| cu(i)-responsive transcriptional regulator | APY03_6631 | Not Available | + | 6835952 - 6836413 | 17176.7 |
| dna-binding heavy metal response regulator | APY03_6632 | Q02540 | + | 6836526 - 6837209 | 25307.6 |
| heavy metal sensor signal transduction histidine kinase | APY03_6633 | I1WSZ3 | + | 6837218 - 6838627 | 50827.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.