Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | APY03_0100 | Q473K3 | - | 107853 - 109961 | 79875.0 |
| aromatic-amino-acid aminotransferase | APY03_0101 | P72173 | + | 110095 - 111285 | 42815.6 |
| intracellular phb depolymerase | APY03_0102 | Not Available | + | 111399 - 112787 | 52025.7 |
| electron transport complex protein rnfb | APY03_0103 | Q3SHB7 | + | 112803 - 113429 | 22199.4 |
| putative amino acid efflux protein | APY03_0104 | Not Available | + | 113426 - 114061 | 22000.5 |
| methylmalonyl-coa epimerase | APY03_0105 | Not Available | - | 114066 - 114554 | 17298.9 |
| propionyl-coa carboxylase biotin-containing subunit | APY03_0106 | Q5LUF3 | - | 114568 - 116616 | 74328.3 |
| propionyl-coa carboxylase carboxyl transferase subunit | APY03_0107 | Q168G2 | - | 116634 - 118166 | 55984.5 |
| putative periplasmic protein kinase argk and related gtpases of g3e family | APY03_0108 | P37895 | - | 118209 - 119258 | 37074.7 |
| methylmalonyl-coa mutase | APY03_0109 | Q3J4D7 | - | 119255 - 121417 | 78004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.