Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | + | 101276 - 101350 | Not Available |
| dna polymerase iii epsilon subunit | APY03_0091 | Q9CPE0 | - | 101421 - 102140 | 26400.4 |
| ferredoxin, 2fe-2s | APY03_0092 | Q51383 | - | 102140 - 102478 | 12374.6 |
| chaperone protein hsca | APY03_0093 | C5CXC5 | - | 102487 - 104343 | 64814.0 |
| chaperone protein hscb | APY03_0094 | Q7W8V0 | - | 104348 - 104890 | 20628.2 |
| iron binding protein isca for iron-sulfur cluster assembly | APY03_0095 | B7UGX4 | - | 104931 - 105254 | 11795.0 |
| iron-sulfur cluster assembly scaffold protein iscu | APY03_0096 | P0ACD6 | - | 105344 - 105757 | 14354.1 |
| cysteine desulfurase, iscs subfamily | APY03_0097 | Q60C64 | - | 105779 - 106999 | 44997.1 |
| iron-sulfur cluster regulator iscr | APY03_0098 | Q2NS30 | - | 107073 - 107609 | 19322.4 |
| hypothetical protein | APY03_0099 | Not Available | - | 107629 - 107769 | 4758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.