Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 1084571 - 1084645 | Not Available |
| transcription repressor of multidrug efflux pump acrab operon, tetr (acrr) family | APY03_1102 | Q9AIU0 | - | 1084689 - 1085318 | 23013.7 |
| rnd efflux system, membrane fusion protein cmea | APY03_1103 | P52477 | + | 1085515 - 1086807 | 44137.1 |
| rnd efflux system, inner membrane transporter cmeb | APY03_1104 | P24181 | + | 1086821 - 1091443 | 164164.0 |
| cytochrome c5 | APY03_1105 | Not Available | + | 1091494 - 1092120 | 21252.1 |
| hypothetical protein | APY03_1106 | Not Available | - | 1092196 - 1092735 | 20090.7 |
| hydrolase, alpha/beta fold family | APY03_1107 | Q96SE0 | - | 1092786 - 1093754 | 34965.9 |
| alternative dihydrofolate reductase 3 | APY03_1108 | Not Available | - | 1093754 - 1094308 | 19554.1 |
| hypothetical protein | APY03_1109 | Not Available | - | 1094315 - 1095085 | 27723.6 |
| lema family protein | APY03_1110 | Not Available | + | 1095137 - 1095748 | 22918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.