Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | APY03_0071 | Not Available | - | 74893 - 76983 | 74510.5 |
| hypothetical protein | APY03_0072 | Not Available | - | 76980 - 77633 | 23703.4 |
| aspartyl protease-like protein | APY03_0073 | Not Available | + | 77917 - 78480 | 19419.3 |
| isocitrate dehydrogenase | APY03_0074 | Q945K7 | - | 78483 - 79514 | 36357.1 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i alpha | APY03_0075 | Not Available | + | 79624 - 80784 | 41684.0 |
| isochorismatase | APY03_0076 | Q5U3Z3 | - | 80756 - 81358 | 22074.6 |
| pqq-dependent oxidoreductase, gdhb family | APY03_0077 | P75804 | - | 81502 - 82527 | 36727.8 |
| hypothetical protein | APY03_0078 | P76190 | + | 82937 - 83404 | 17158.4 |
| dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex | APY03_0079 | P0A9P2 | - | 83472 - 85307 | 63405.6 |
| dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex | APY03_0080 | Q59098 | - | 85318 - 86619 | 45281.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.