Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation protein tatb | APY03_7003 | A1VK48 | + | 7240885 - 7241343 | 17056.5 |
| twin-arginine translocation protein tatc | APY03_7004 | P54085 | + | 7241409 - 7242209 | 29233.5 |
| outer membrane stress sensor protease degs | APY03_7005 | A6VUA4 | - | 7242219 - 7243442 | 42578.7 |
| hypothetical protein | APY03_7006 | Q8XVA0 | + | 7243636 - 7244379 | 26054.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APY03_7007 | B2IDU5 | + | 7244376 - 7245422 | 35732.6 |
| large-conductance mechanosensitive channel | APY03_7008 | C5CQL2 | - | 7245409 - 7245837 | 15286.2 |
| hypothetical protein | APY03_7009 | Not Available | - | 7245834 - 7245992 | 5292.18 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | APY03_7010 | O31214 | + | 7245991 - 7246605 | 21878.1 |
| ubiquinol--cytochrome c reductase, cytochrome b subunit | APY03_7011 | O31215 | + | 7246620 - 7248020 | 52803.2 |
| ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit | APY03_7012 | Q82W83 | + | 7248041 - 7248796 | 27916.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.