Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_6654 | Not Available | + | 6857477 - 6857599 | 4316.21 |
| putative exported protein | APY03_6655 | Not Available | - | 6857759 - 6858730 | 34454.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | APY03_6656 | P42270 | - | 6858805 - 6859605 | 29414.3 |
| protocatechuate 4,5-dioxygenase beta chain | APY03_6657 | Not Available | - | 6859645 - 6860463 | 30071.9 |
| hypothetical protein | APY03_6658 | Not Available | - | 6860465 - 6860785 | 11809.3 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | APY03_6659 | Not Available | - | 6860800 - 6862257 | 52434.8 |
| 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase | APY03_6660 | Not Available | - | 6862261 - 6862998 | 27198.5 |
| 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase | APY03_6661 | Not Available | - | 6862995 - 6863681 | 24535.4 |
| aldehyde dehydrogenase | APY03_6662 | H8ZPX2 | - | 6863695 - 6865116 | 50231.4 |
| acetolactate synthase large subunit | APY03_6663 | Q57725 | - | 6865113 - 6866807 | 59430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.