Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein forms channel for type iv secretion of t-dna complex (virb10) | APY03_6474 | Q8YDZ0 | - | 6672809 - 6674149 | 46860.5 |
| virb9 | APY03_6475 | Q7VSX5 | - | 6674146 - 6674928 | 28784.8 |
| inner membrane protein forms channel for type iv secretion of t-dna complex, virb8 | APY03_6476 | Not Available | - | 6674985 - 6675707 | 26523.3 |
| inner membrane protein of type iv secretion of t-dna complex, virb6 | APY03_6477 | Not Available | - | 6675861 - 6676595 | 26029.2 |
| minor pilin of type iv secretion complex, virb5 | APY03_6478 | Not Available | - | 6677192 - 6677926 | 27144.6 |
| virb4 | APY03_6479 | Q6FYW7 | - | 6677919 - 6680426 | 93664.0 |
| putative type iv secretion system protein b3 | APY03_6480 | Not Available | - | 6680440 - 6680808 | 13911.2 |
| hypothetical protein | APY03_6481 | Not Available | - | 6680820 - 6681101 | 9807.42 |
| hypothetical protein | APY03_6482 | Not Available | - | 6681137 - 6681436 | 11013.5 |
| hypothetical protein | APY03_6483 | Not Available | - | 6681508 - 6681918 | 14238.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.