Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_6464 | Not Available | - | 6661254 - 6662942 | 58576.0 |
| putative guanyl-specific ribonuclease | APY03_6465 | Not Available | - | 6663590 - 6663892 | 10914.6 |
| hypothetical protein | APY03_6466 | Not Available | + | 6663863 - 6665230 | 50113.6 |
| zeta toxin family protein | APY03_6467 | Not Available | - | 6665395 - 6666348 | 35978.1 |
| hypothetical protein | APY03_6468 | Not Available | - | 6666579 - 6667058 | 18055.5 |
| conjugative transfer protein trbp | APY03_6469 | Not Available | - | 6667169 - 6667906 | 26648.4 |
| phosphatidylserine/phosphatidylglycerophosphate | APY03_6470 | Q1RK58 | - | 6667910 - 6668317 | 14631.3 |
| dna primase | APY03_6471 | Not Available | - | 6668484 - 6669581 | 40773.1 |
| coupling protein vird4, atpase required for t-dna transfer | APY03_6472 | Not Available | - | 6669765 - 6671663 | 70405.7 |
| virb11 | APY03_6473 | Q9RNC7 | - | 6671692 - 6672840 | 42181.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.