Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal transporter, zip family | APY03_6444 | Q06916 | - | 6638749 - 6639654 | 30598.0 |
| hydrolase (had superfamily) | APY03_6445 | Not Available | - | 6639718 - 6640653 | 35375.4 |
| hypothetical protein | APY03_6446 | Not Available | + | 6640723 - 6640836 | 4367.37 |
| nadh-ubiquinone oxidoreductase chain e | APY03_6447 | P19234 | + | 6641272 - 6641751 | 17640.3 |
| hypothetical protein | APY03_6448 | Not Available | - | 6641784 - 6641969 | 6439.07 |
| lysr-family transcriptional regulator | APY03_6449 | Not Available | - | 6642543 - 6643475 | 34339.6 |
| gentisate 1,2-dioxygenase | APY03_6450 | Not Available | + | 6643589 - 6644746 | 42773.4 |
| fumarylacetoacetase | APY03_6451 | O86042 | + | 6644808 - 6645392 | 20738.8 |
| maleylacetoacetate isomerase glutathione s-transferase, zeta | APY03_6452 | Q9KSB2 | + | 6645407 - 6646051 | 23593.5 |
| putative n-hydroxybenzoate hydroxylase | APY03_6453 | Q3S4B7 | + | 6646108 - 6647268 | 42448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.