Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase, family 4 | APY03_0350 | Not Available | + | 378063 - 378815 | 26066.7 |
| hypothetical protein | APY03_0351 | Not Available | + | 379780 - 379941 | 5784.09 |
| hypothetical protein | APY03_0352 | Q7MZD8 | + | 380673 - 381044 | 13502.7 |
| hypothetical protein | APY03_0353 | Not Available | + | 381402 - 381533 | 4871.99 |
| putative rhs-related protein | APY03_0354 | Not Available | - | 382062 - 383516 | 50982.7 |
| dna binding response regulator prra (rega) | APY03_0355 | P42508 | - | 383872 - 384411 | 19528.5 |
| sensor histidine kinase prrb (regb) | APY03_0356 | P0C0Z0 | - | 384401 - 385696 | 46513.9 |
| cytochrome oxidase biogenesis protein surf1, facilitates heme a insertion | APY03_0357 | A4IHH4 | - | 385680 - 386501 | 29729.4 |
| cytochrome o ubiquinol oxidase subunit iv | APY03_0358 | P0ABJ7 | - | 386498 - 386893 | 14614.0 |
| cytochrome o ubiquinol oxidase subunit iii | APY03_0359 | Q9WWR3 | - | 386890 - 387531 | 23464.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.