Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ortho-halobenzoate 1,2-dioxygenase beta-isp protein ohba | APY03_0170 | Not Available | + | 179929 - 180444 | 19287.2 |
| 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase | APY03_0171 | Q12BV1 | + | 180462 - 181457 | 36347.3 |
| leucyl aminopeptidase (aminopeptidase t) | APY03_0172 | Not Available | + | 181502 - 182524 | 37237.7 |
| n-carbamoylsarcosine amidase | APY03_0173 | Not Available | + | 182521 - 183162 | 22903.5 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_0174 | Not Available | + | 183242 - 184420 | 42089.7 |
| high-affinity branched-chain amino acid transport system permease protein livh | APY03_0175 | P0AEX8 | + | 184436 - 185305 | 30803.3 |
| branched-chain amino acid abc transporter, permease protein | APY03_0176 | Not Available | + | 185359 - 186315 | 33489.2 |
| branched-chain amino acid transport atp-binding protein livg | APY03_0177 | Not Available | + | 186312 - 187076 | 27644.6 |
| branched-chain amino acid transport atp-binding protein livf | APY03_0178 | Not Available | + | 187057 - 187779 | 25715.3 |
| major facilitator superfamily mfs_1 | APY03_0179 | Not Available | + | 188008 - 189006 | 34290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.