Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exoenzymes regulatory protein aepa precursor | APY03_0160 | A0A1I9LN01 | + | 166348 - 168093 | 62242.3 |
| 3-methylmercaptopropionyl-coa dehydrogenase (dmdc) | APY03_0161 | Q5LLW7 | - | 168280 - 169026 | 26260.5 |
| transcriptional regulator, marr family | APY03_0162 | Not Available | - | 170364 - 170795 | 16320.9 |
| hypothetical protein | APY03_0163 | Not Available | - | 170977 - 171126 | 5524.49 |
| carbon monoxide dehydrogenase small chain | APY03_0164 | D7REY5 | - | 171904 - 173121 | 43874.7 |
| carbon monoxide dehydrogenase medium chain | APY03_0165 | O87681 | - | 173128 - 173979 | 30180.3 |
| carbon monoxide dehydrogenase-like large chain | APY03_0166 | D7REY3 | - | 173976 - 176357 | 85334.1 |
| ferredoxin | APY03_0167 | Q51493 | + | 177025 - 177342 | 11480.5 |
| putative ferredoxin reductase | APY03_0168 | B7N6C9 | + | 177339 - 178592 | 44026.6 |
| ortho-halobenzoate 1,2-dioxygenase alpha-isp protein ohbb | APY03_0169 | Not Available | + | 178622 - 179932 | 49756.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.