Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate synthase | APY03_1785 | B9MEU8 | - | 1840515 - 1842350 | 65478.9 |
| octaprenyl-diphosphate synthase | APY03_1786 | Q42698 | - | 1842413 - 1843327 | 31934.3 |
| exodeoxyribonuclease vii small subunit | APY03_1787 | Q12CR1 | - | 1843324 - 1843611 | 10104.0 |
| phenylpropionate dioxygenase large terminal subunit | APY03_1788 | Not Available | + | 1843840 - 1844976 | 43060.9 |
| putative membrane protein | APY03_1789 | Not Available | + | 1845002 - 1845919 | 32084.9 |
| thiosulfate sulfurtransferase, rhodanese | APY03_1790 | Q9I452 | + | 1845937 - 1846848 | 32166.1 |
| putative zinc-binding protein | APY03_1791 | Not Available | + | 1846845 - 1847390 | 19529.6 |
| methionine abc transporter atp-binding protein | APY03_1792 | Q2G7G7 | + | 1847392 - 1848096 | 25316.6 |
| abc-type antimicrobial peptide transport system, permease component | APY03_1793 | Not Available | + | 1848093 - 1849355 | 44966.2 |
| hypothetical protein | APY03_1794 | Not Available | + | 1849358 - 1849957 | 21530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.