Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_1675 | Not Available | + | 1707519 - 1707635 | 4232.07 |
| propionate--coa ligase | APY03_1676 | P55912 | + | 1708162 - 1710078 | 69348.0 |
| 2-oxoglutarate dehydrogenase e1 component | APY03_1677 | Q59106 | + | 1710734 - 1713166 | 89958.3 |
| dihydrolipoamide succinyltransferase component (e2) of 2-oxoglutarate dehydrogenase complex | APY03_1678 | P52993 | + | 1713575 - 1714498 | 32761.8 |
| dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase | APY03_1679 | P52992 | + | 1714508 - 1715938 | 50292.5 |
| atpase | APY03_1680 | P64613 | + | 1715943 - 1717040 | 42136.6 |
| hypothetical protein | APY03_1681 | Not Available | + | 1717037 - 1717681 | 24689.9 |
| protein serine/threonine phosphatase | APY03_1682 | Not Available | - | 1717697 - 1718512 | 29550.2 |
| hypothetical protein | APY03_1683 | Not Available | + | 1718601 - 1718807 | 8097.85 |
| ding family atp-dependent helicase yoaa | APY03_1684 | P76257 | + | 1718807 - 1720888 | 75361.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.