Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine transferase epta specific for the 1 phosphate group of core-lipid a | APY03_1635 | P30845 | - | 1655871 - 1657376 | 53913.8 |
| dna-binding heavy metal response regulator | APY03_1636 | I1WSZ4 | + | 1657753 - 1658436 | 25277.6 |
| heavy metal sensor histidine kinase | APY03_1637 | Not Available | + | 1658433 - 1659764 | 48382.7 |
| hypothetical protein | APY03_1638 | Not Available | - | 1660930 - 1661346 | 14139.9 |
| cobalt-zinc-cadmium resistance protein czca | APY03_1639 | Not Available | - | 1661420 - 1664644 | 116668.0 |
| cobalt/zinc/cadmium efflux rnd transporter, membrane fusion protein, czcb family | APY03_1640 | P13510 | - | 1664661 - 1666268 | 56435.7 |
| heavy metal rnd efflux outer membrane protein, czcc family | APY03_1641 | P13509 | - | 1666278 - 1667573 | 46061.8 |
| tisrso5 | APY03_1642 | Not Available | - | 1669274 - 1669480 | 7858.38 |
| hypothetical protein | APY03_1643 | Not Available | + | 1672452 - 1672694 | 9056.63 |
| transcriptional regulator, lysr family protein | APY03_1644 | O35038 | + | 1672749 - 1673705 | 35021.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.