Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_1625 | Not Available | + | 1643212 - 1643577 | 13361.2 |
| histidinol-phosphate aminotransferase | APY03_1626 | A1VK38 | + | 1643583 - 1644677 | 39094.7 |
| imidazoleglycerol-phosphate dehydratase | APY03_1627 | B9MDV5 | + | 1644674 - 1645303 | 22473.9 |
| imidazole glycerol phosphate synthase amidotransferase subunit | APY03_1628 | Q39K87 | + | 1645342 - 1645956 | 22435.7 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | APY03_1629 | C5CQJ5 | + | 1646007 - 1646750 | 26193.3 |
| nitrogen regulatory protein p-ii | APY03_1630 | Not Available | - | 1648968 - 1649306 | 12339.5 |
| cobalt-zinc-cadmium resistance protein czca | APY03_1631 | P94177 | - | 1649303 - 1652428 | 112970.0 |
| cobalt/zinc/cadmium efflux rnd transporter, membrane fusion protein, czcb family | APY03_1632 | Not Available | - | 1652446 - 1653663 | 42249.6 |
| heavy metal rnd efflux outer membrane protein, czcc family | APY03_1633 | Not Available | - | 1653660 - 1654967 | 47340.4 |
| hypothetical protein | APY03_1634 | Not Available | + | 1655285 - 1655497 | 7747.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.