Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | APY03_1365 | A1TWB8 | + | 1373266 - 1374402 | 41561.1 |
| ntp pyrophosphohydrolase | APY03_1366 | Not Available | - | 1374473 - 1374958 | 17723.0 |
| hypothetical protein | APY03_1367 | Not Available | - | 1374969 - 1375403 | 15997.1 |
| response regulator receiver:transcriptional regulatory protein, c-terminal | APY03_1368 | Q9F868 | - | 1375426 - 1375902 | 17909.7 |
| hypothetical protein | APY03_1369 | Not Available | - | 1375905 - 1376120 | 7905.61 |
| nad(p) transhydrogenase alpha subunit | APY03_1370 | Not Available | + | 1376142 - 1377257 | 38544.8 |
| nad(p) transhydrogenase alpha subunit | APY03_1371 | Not Available | + | 1377275 - 1377598 | 11405.4 |
| phage transcriptional regulator, alpa | APY03_1372 | Not Available | - | 1379488 - 1379883 | 13717.3 |
| integrase | APY03_1373 | Not Available | - | 1380425 - 1381666 | 46052.7 |
| Trna-pro | Not Available | Not Available | + | 1381884 - 1381960 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.