Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | APY03_1355 | Q04973 | + | 1362858 - 1363928 | 38936.3 |
| lipid carrier : udp-n-acetylgalactosaminyltransferase | APY03_1356 | Q0P9C9 | + | 1363925 - 1365046 | 41255.6 |
| lipid carrier : udp-n-acetylgalactosaminyltransferase | APY03_1357 | P71062 | + | 1365043 - 1365648 | 23180.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | APY03_1358 | Q7DBF7 | + | 1365645 - 1366304 | 22994.9 |
| hypothetical protein | APY03_1359 | Not Available | + | 1367532 - 1367885 | 12855.1 |
| nucleoside-diphosphate sugar epimerase/dehydratase | APY03_1360 | Not Available | + | 1367878 - 1368333 | 16198.5 |
| nucleoside-diphosphate sugar epimerase/dehydratase | APY03_1361 | P39853 | + | 1368354 - 1369850 | 54191.1 |
| protein of unknown function duf55 | APY03_1362 | O94645 | - | 1369869 - 1370333 | 17300.8 |
| luciferase-like protein | APY03_1363 | P0ADV6 | + | 1370445 - 1371425 | 35450.4 |
| protein of unknown function upf0089 | APY03_1364 | P9WKC0 | - | 1371466 - 1372170 | 23889.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.