Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine dehydratase/bile acid-inducible protein f | APY03_1227 | Q55CV9 | - | 1247412 - 1248467 | 38395.2 |
| uncharacterized protein upf0065 | APY03_1228 | Not Available | - | 1248498 - 1249448 | 33211.1 |
| cyclohexanone monooxygenase | APY03_1229 | Q47PU3 | - | 1249480 - 1251132 | 60746.7 |
| flavodoxin reductases (ferredoxin-nadph reductases) family 1 | APY03_1230 | Not Available | - | 1251409 - 1252377 | 34443.0 |
| putative exported protein | APY03_1231 | Q44018 | - | 1252464 - 1253237 | 26909.2 |
| hypothetical protein | APY03_1232 | Not Available | - | 1253454 - 1254101 | 22577.9 |
| esterase/lipase/thioesterase | APY03_1233 | P9WK86 | - | 1254343 - 1255044 | 25522.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | APY03_1234 | O67610 | - | 1255700 - 1256326 | 22026.4 |
| hypothetical protein | APY03_1235 | Not Available | + | 1256312 - 1256437 | 4136.82 |
| hypothetical protein | APY03_1236 | Not Available | - | 1256653 - 1257033 | 13779.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.