Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | APY03_1207 | A1B8Z4 | - | 1222620 - 1223414 | 28203.3 |
| 3-dehydroquinate dehydratase ii | APY03_1208 | Q89GF9 | + | 1223562 - 1224011 | 16186.6 |
| trap-type c4-dicarboxylate transport system, periplasmic component | APY03_1209 | Q16BC9 | + | 1224054 - 1225046 | 36473.3 |
| trap-type c4-dicarboxylate transport system small permease component-like protein | APY03_1210 | Not Available | + | 1225055 - 1225564 | 18868.6 |
| trap-type c4-dicarboxylate transport system, large permease component | APY03_1211 | Q9KR66 | + | 1225561 - 1226862 | 45588.9 |
| fumarate hydratase class ii | APY03_1212 | Q8XQE8 | - | 1226971 - 1227816 | 29769.8 |
| cobalt/zinc/cadmium efflux rnd transporter, membrane fusion protein, czcb family | APY03_1213 | Q8CWA2 | - | 1228591 - 1229505 | 32445.2 |
| heavy metal rnd efflux outer membrane protein, czcc family | APY03_1214 | Not Available | - | 1229502 - 1230794 | 46056.5 |
| hypothetical protein | APY03_1215 | Not Available | - | 1231334 - 1231447 | 4010.83 |
| hypothetical protein | APY03_1216 | Not Available | + | 1232666 - 1233793 | 41108.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.