Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_0983 | Not Available | - | 1152386 - 1153960 | 53358.7 |
| ssu ribosomal protein s10p (s20e) | APY03_0984 | Q21RV7 | - | 1154116 - 1154430 | 11808.6 |
| type iv secretion system protein vird4 | APY03_1149 | Not Available | - | 1154956 - 1156572 | 59044.4 |
| putative lipoprotein | APY03_1150 | Not Available | - | 1157198 - 1157476 | 10152.2 |
| hypothetical protein | APY03_1151 | Not Available | + | 1158340 - 1158477 | 5055.96 |
| hypothetical protein | APY03_1152 | Not Available | - | 1159819 - 1161267 | 53519.2 |
| branched-chain amino acid transport atp-binding protein livf | APY03_1153 | Not Available | - | 1161372 - 1162067 | 25503.2 |
| branched-chain amino acid transport atp-binding protein livg | APY03_1154 | Q1M8E0 | - | 1162067 - 1162837 | 27752.7 |
| branched-chain amino acid transport system permease protein livm | APY03_1155 | Not Available | - | 1162834 - 1164198 | 48822.6 |
| high-affinity branched-chain amino acid transport system permease protein livh | APY03_1156 | Not Available | - | 1164201 - 1165154 | 34038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.