Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system permease protein livm | APY03_1092 | Not Available | - | 1074296 - 1075270 | 34293.1 |
| high-affinity branched-chain amino acid transport system permease protein livh | APY03_1093 | P0A2J2 | - | 1075284 - 1076141 | 30492.7 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_1094 | Not Available | - | 1076185 - 1077390 | 43115.6 |
| chitooligosaccharide deacetylase | APY03_1095 | Not Available | - | 1077437 - 1078288 | 32233.2 |
| branched-chain amino acid transport atp-binding protein livf | APY03_1096 | P22731 | - | 1078345 - 1079058 | 25219.7 |
| amidase | APY03_1097 | B8G974 | - | 1079069 - 1080460 | 49690.3 |
| putative exported protein | APY03_1098 | Not Available | - | 1080766 - 1081740 | 34135.3 |
| hypothetical protein | APY03_1099 | Not Available | - | 1081752 - 1082381 | 23263.1 |
| hypothetical protein | APY03_1100 | A0A084AFG6 | - | 1082387 - 1083451 | 39897.5 |
| transcriptional regulator, lysr family | APY03_1101 | Not Available | + | 1083541 - 1084449 | 32930.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.