Ehrlichia chaffeensis str. Arkansas

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Anaplasmataceae

Genus

Ehrlichia

Description

Ehrlichia chaffeensis (strain Arkansas) is an intracellular vector-borne pathogen that causes human ehrlichiosis. It depends on hematophagous ticks as a vector and wild mammals as a reservoir host. It has been most commonly identified in the Lone Star tick (Amblyomma americanum), with white-tailed deer considered to be the major reservoir. E. chaffeensis is the causative agent of human monocytic ehrlichiosis (HME), a disease that was discovered in 1986. It is a systemic disease that is indistinguishable from human granulocytic ehrlichiosis (HGA) caused by Anaplasma phagocytophilum. It replicates in monocytes/macrophages. The genome of E. chaffeensis is made up of a singular chromosome. Despite the limited ability of Rickettsiales to synthesize amino acids, E.chaffeensis seems to be able to synthesize arginine and lysine. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyAnaplasmataceae
GenusEhrlichia
SpeciesEhrlichia chaffeensis
StrainArkansas

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Ehrlichia chaffeensis str. Arkansas
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Ehrlichia chaffeensis str. Arkansas

Accession NumberNC_007799.1

Gene Summary

Adenine Count

413077 bp

Thymine Count

409112 bp

Guanine Count

180030 bp

Cytosine Count

174029 bp

Genome Length

1176248 bp

Protein-coding Genes

931 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
parb/repb/spo0j family partition proteinECH_RS00020Q9ZE87+2 - 84731783.9
ribosome maturation factor rimmECH_RS00025Q2GI96+1005 - 153219793.7
trna (guanosine(37)-n1)-methyltransferase trmdECH_RS00030Q2GI95+1555 - 222324945.1
50s ribosomal protein l19ECH_RS00035Q2GI94+2216 - 259314574.9
cina family proteinECH_RS00040A7G9W4-2852 - 333717538.3
threonine--trna ligaseECH_RS00045Q2GI92+3683 - 558473287.9
translation initiation factor if-3ECH_RS00050Q2GI91+5609 - 613020018.8
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeECH_RS00055P74415-6417 - 688417596.1
bax inhibitor-1/ycca family proteinECH_RS00060Q9ZE15-6904 - 760525703.8
hypothetical proteinECH_RS00065Not Available-7674 - 868737879.6

Displaying genes 1 – 10 of 974 in total

Pathways

23 pathways

Metabolites

139 records
Metabolite IDMetabolite nameStructureCAS number
BASm0004532(6R)-NADHXC21H29N7O15P2Chemical structure of (6R)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da
BASm0004533(6S)-NADPHXC21H28N7O18P3Chemical structure of (6S)-NADPHXNot available
Average759.409Da
Monoisotopic759.0725624Da
BASm0004534(6R)-NADPHXC21H28N7O18P3Chemical structure of (6R)-NADPHXNot available
Average759.409Da
Monoisotopic759.072562403Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm00063042-iminoacetateC2H3NO2Chemical structure of 2-iminoacetateNot available
Average73.0507Da
Monoisotopic73.01637835Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0010316N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8PChemical structure of N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average285.169Da
Monoisotopic285.049326Da
BASm00107383-phosphoshikimateC7H8O8PChemical structure of 3-phosphoshikimateNot available
Average251.108Da
Monoisotopic250.997324955Da
BASm0010825N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamideC8H13N2O9PChemical structure of N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average312.172Da
Monoisotopic312.0369642Da
BASm00108262-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidineC8H15N3O8PChemical structure of 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidineNot available
Average312.195Da
Monoisotopic312.060225Da

Displaying 31–40 of 139 metabolites