Ehrlichia chaffeensis str. Arkansas

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Anaplasmataceae

Genus

Ehrlichia

Description

Ehrlichia chaffeensis (strain Arkansas) is an intracellular vector-borne pathogen that causes human ehrlichiosis. It depends on hematophagous ticks as a vector and wild mammals as a reservoir host. It has been most commonly identified in the Lone Star tick (Amblyomma americanum), with white-tailed deer considered to be the major reservoir. E. chaffeensis is the causative agent of human monocytic ehrlichiosis (HME), a disease that was discovered in 1986. It is a systemic disease that is indistinguishable from human granulocytic ehrlichiosis (HGA) caused by Anaplasma phagocytophilum. It replicates in monocytes/macrophages. The genome of E. chaffeensis is made up of a singular chromosome. Despite the limited ability of Rickettsiales to synthesize amino acids, E.chaffeensis seems to be able to synthesize arginine and lysine. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyAnaplasmataceae
GenusEhrlichia
SpeciesEhrlichia chaffeensis
StrainArkansas

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Ehrlichia chaffeensis str. Arkansas
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Ehrlichia chaffeensis str. Arkansas

Accession NumberNC_007799.1

Gene Summary

Adenine Count

413077 bp

Thymine Count

409112 bp

Guanine Count

180030 bp

Cytosine Count

174029 bp

Genome Length

1176248 bp

Protein-coding Genes

931 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
parb/repb/spo0j family partition proteinECH_RS00020Q9ZE87+2 - 84731783.9
ribosome maturation factor rimmECH_RS00025Q2GI96+1005 - 153219793.7
trna (guanosine(37)-n1)-methyltransferase trmdECH_RS00030Q2GI95+1555 - 222324945.1
50s ribosomal protein l19ECH_RS00035Q2GI94+2216 - 259314574.9
cina family proteinECH_RS00040A7G9W4-2852 - 333717538.3
threonine--trna ligaseECH_RS00045Q2GI92+3683 - 558473287.9
translation initiation factor if-3ECH_RS00050Q2GI91+5609 - 613020018.8
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeECH_RS00055P74415-6417 - 688417596.1
bax inhibitor-1/ycca family proteinECH_RS00060Q9ZE15-6904 - 760525703.8
hypothetical proteinECH_RS00065Not Available-7674 - 868737879.6

Displaying genes 1 – 10 of 974 in total

Pathways

23 pathways

Metabolites

139 records
Metabolite IDMetabolite nameStructureCAS number
BASm00033514-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PSChemical structure of 4-methyl-5-(2-phosphooxyethyl)-thiazoleNot available
Average221.17Da
Monoisotopic220.9922631Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003841N-[(R)-4-phosphopantothenoyl]-L-cysteineC12H20N2O9PSChemical structure of N-[(R)-4-phosphopantothenoyl]-L-cysteineNot available
Average399.33Da
Monoisotopic399.064359144Da
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da
BASm0003997Fe(II)-heme oC49H56FeN4O5Chemical structure of Fe(II)-heme oNot available
Average836.856Da
Monoisotopic836.361104Da
BASm0004172(R)-4'-phosphopantetheineC11H21N2O7PSChemical structure of (R)-4'-phosphopantetheineNot available
Average356.33Da
Monoisotopic356.081806356Da
BASm0004531(6S)-NADHXC21H29N7O15P2Chemical structure of (6S)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da

Displaying 21–30 of 139 metabolites