Pseudomonas syringae pv. syringae B728a

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

This plant pathogen causes disease in a wide range of plants and crops, including bacterial speck on tomatoes. Black specks form on the leaves and fruit, stunting growth. This gram negative pathogen also causes halo blight of beans. It is primarily seed-borne, and can also be spread from plant to plant by rain. Pseudomonas syringae is a model organism in plant pathology.This is a very versatile organism with several important phenotypes that have made it a focus of study and commercial application and a relevant organism for the DOE in the USA to support resarch, as this plant pathogen causes disease in a variety of plant species, severely impacting both food and biomass production.Also strains of P. syringae have been exploited for a variety of industrial purposes of significance to DOE. For example, many strains of this species are active as ice nuclei catalyzing ice formation at temperatures approaching 0 C. For this reason they have been exploited as artificial ice nucleating agents in processes such as those involved in artificial snow production. A major use of the freeze-dried cells of P. syringae used in such an application has been in the creation of artificial ice islands to facilitate offshore oil drilling in cold oceans such as in the arctic. In a similar application there has been interest in using such ice nucleation active bacteria for the production of artificial mountains of ice in the winter for use in summer cooling of large industrial and office buildings. There is also considerable activity in the study of the use of such bacterial ice nuclei in improving the process of freezing of various foods, including frozen emulsified foods such as ice cream to improve both the energy efficiency of the process and quality of the product.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainB728a

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. syringae B728a
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Pseudomonas syringae pv. syringae B728a


Gene Summary

Adenine Count

1357034 bp

Thymine Count

1331887 bp

Guanine Count

1891949 bp

Cytosine Count

1937382 bp

Genome Length

6518252 bp

Protein-coding Genes

5783 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rhs repeat-associated core domain-containing proteinPSYR_RS27240Not Available-5782166 - 578325740293.8
delta-60 repeat domain-containing proteinPSYR_RS25320Not Available-5783922 - 578522946207.6
molybdopterin-binding proteinPSYR_RS25325Not Available-5785597 - 57858127628.36
aliphatic sulfonates abc transporter atp-binding proteinPSYR_RS25330Not Available-5785839 - 578665129478.2
aliphatic sulfonate abc transporter permease ssucPSYR_RS25335Not Available-5786648 - 578744528467.4
sulfonate abc transporter substrate-binding proteinPSYR_RS25340Not Available-5787474 - 578843934591.8
peroxiredoxinPSYR_RS25350Not Available-5788822 - 578946023950.4
oprd family outer membrane porinPSYR_RS25355Not Available-5789629 - 579097548547.1
hypothetical proteinPSYR_RS25360Not Available-5791998 - 579243816581.8
trna (cytidine(34)-2'-o)-methyltransferasePSYR_RS25365Not Available+5792437 - 579289216866.1

Displaying genes 10951 – 10960 of 11225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites