Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | SDE_RS04660 | Not Available | + | 1143788 - 1144369 | 21351.7 |
| urate hydroxylase puud | SDE_RS04665 | Not Available | + | 1144552 - 1145199 | 23344.2 |
| hypothetical protein | SDE_RS04670 | Not Available | + | 1145214 - 1145960 | 27119.5 |
| fumarate hydratase | SDE_RS04675 | Not Available | + | 1146113 - 1147633 | 54439.4 |
| tonb-dependent receptor | SDE_RS04680 | Not Available | + | 1148014 - 1150992 | 109469.0 |
| hypothetical protein | SDE_RS04685 | Not Available | + | 1151069 - 1153243 | 75999.4 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SDE_RS04690 | Not Available | + | 1153431 - 1153772 | 13098.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SDE_RS21160 | Not Available | + | 1153983 - 1156064 | 77111.1 |
| phosphoribosylglycinamide formyltransferase | SDE_RS04700 | Not Available | - | 1156121 - 1156780 | 23599.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | SDE_RS04705 | Not Available | - | 1156817 - 1157875 | 36978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.