Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | SDE_RS04165 | Not Available | - | 1014924 - 1015964 | 38593.7 |
| family 43 glycosylhydrolase | SDE_RS04170 | Not Available | + | 1016256 - 1017344 | 40704.2 |
| aldose epimerase family protein | SDE_RS04175 | Not Available | + | 1017392 - 1018465 | 39230.2 |
| glycoside hydrolase family 43 protein | SDE_RS04180 | Not Available | + | 1018538 - 1019491 | 35089.9 |
| glycoside hydrolase family 97 protein | SDE_RS04185 | Not Available | + | 1019682 - 1021667 | 73212.8 |
| family 43 glycosylhydrolase | SDE_RS04190 | Not Available | + | 1021703 - 1023526 | 67230.5 |
| hypothetical protein | SDE_RS04195 | Not Available | + | 1023761 - 1023982 | 8411.85 |
| abc transporter substrate-binding protein | SDE_RS04200 | Not Available | - | 1023984 - 1024904 | 34957.5 |
| hypothetical protein | SDE_RS04205 | Not Available | - | 1025135 - 1026568 | 52261.6 |
| tonb-dependent receptor plug domain-containing protein | SDE_RS04210 | Not Available | + | 1026757 - 1029138 | 89267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.