Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SDE_RS04115 | Not Available | + | 1001495 - 1002838 | 49526.5 |
| family 43 glycosylhydrolase | SDE_RS04120 | Not Available | + | 1002877 - 1003821 | 35941.2 |
| glycoside hydrolase family 127 protein | SDE_RS04125 | Not Available | + | 1003994 - 1006405 | 91086.5 |
| duf6359 domain-containing protein | SDE_RS04130 | Not Available | + | 1006687 - 1008969 | 79390.2 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | SDE_RS04135 | Not Available | + | 1009028 - 1011043 | 73204.5 |
| helix-turn-helix domain-containing protein | SDE_RS21145 | Not Available | - | 1011166 - 1011660 | 18649.7 |
| pseudouridine synthase | SDE_RS04145 | Not Available | - | 1011827 - 1012801 | 35450.1 |
| tetratricopeptide repeat protein | SDE_RS04150 | Not Available | + | 1013038 - 1013757 | 26186.1 |
| hypothetical protein | SDE_RS04155 | Not Available | + | 1013810 - 1014247 | 15493.0 |
| duf924 family protein | SDE_RS04160 | Not Available | + | 1014333 - 1014869 | 20611.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.