Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | SDE_RS03365 | Not Available | + | 793004 - 794920 | 69858.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SDE_RS03370 | Not Available | + | 795077 - 795730 | 24215.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SDE_RS03375 | Not Available | + | 795727 - 796770 | 35896.0 |
| adenosylcobinamide-gdp ribazoletransferase | SDE_RS03380 | Not Available | + | 796774 - 797682 | 32817.5 |
| alpha-ribazole phosphatase | SDE_RS03385 | Not Available | + | 797760 - 798293 | 19777.9 |
| lytic polysaccharide monooxygenase | SDE_RS03390 | Not Available | - | 798414 - 799724 | 46197.3 |
| cell envelope integrity protein cred | SDE_RS03395 | Not Available | + | 800285 - 801646 | 50093.3 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | SDE_RS03400 | Not Available | - | 801714 - 803168 | 52466.6 |
| glycoside hydrolase family 9 protein | SDE_RS03405 | Not Available | + | 803723 - 805459 | 62700.2 |
| lysr family transcriptional regulator | SDE_RS03410 | Not Available | - | 805502 - 806383 | 33207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.