Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wd40/yvtn/bnr-like repeat-containing protein | SDE_RS03270 | Not Available | - | 769164 - 771260 | 75871.7 |
| hypothetical protein | SDE_RS03275 | Not Available | - | 771317 - 772222 | 34234.7 |
| hypothetical protein | SDE_RS03280 | Not Available | - | 772787 - 773707 | 34070.2 |
| rpib/laca/lacb family sugar-phosphate isomerase | SDE_RS03285 | Not Available | + | 774234 - 774872 | 22866.3 |
| hesa/moeb/thif family protein | SDE_RS03290 | Not Available | + | 775024 - 775770 | 27013.5 |
| class i sam-dependent rrna methyltransferase | SDE_RS03295 | Not Available | + | 775829 - 777019 | 43962.6 |
| trab/gumn family protein | SDE_RS03300 | Not Available | - | 777092 - 777973 | 32444.4 |
| tonb-dependent receptor | SDE_RS03305 | Not Available | - | 778178 - 780256 | 76816.5 |
| tonb-dependent receptor plug domain-containing protein | SDE_RS22185 | Not Available | - | 780159 - 780632 | 17079.3 |
| nad-dependent epimerase | SDE_RS03310 | Not Available | - | 780820 - 781827 | 37516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.