Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin | SDE_RS02530 | Not Available | + | 566600 - 566920 | 11225.2 |
| hypothetical protein | SDE_RS02535 | Not Available | + | 567053 - 567403 | 13542.9 |
| hypothetical protein | SDE_RS02540 | Not Available | + | 567612 - 568028 | 15819.7 |
| tyrosine-type recombinase/integrase | SDE_RS02545 | Not Available | - | 568059 - 569147 | 42358.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | SDE_RS02550 | Not Available | - | 569625 - 570350 | 26893.7 |
| methylenetetrahydrofolate reductase | SDE_RS02555 | Not Available | - | 570731 - 571624 | 33614.6 |
| adenosylhomocysteinase | SDE_RS02560 | Not Available | - | 571701 - 573092 | 50800.1 |
| methionine adenosyltransferase | SDE_RS02565 | Not Available | - | 573160 - 574308 | 41178.8 |
| arsr/smtb family transcription factor | SDE_RS02570 | Not Available | - | 574349 - 575356 | 37006.8 |
| transketolase | SDE_RS02575 | Not Available | + | 575670 - 577673 | 71525.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.