Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SDE_RS02025 | Not Available | - | 471723 - 473462 | 65547.8 |
| alkaline phosphatase phox | SDE_RS02030 | Not Available | - | 473642 - 475537 | 67194.2 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | SDE_RS02035 | Not Available | - | 475843 - 477126 | 47024.8 |
| lipid a export permease/atp-binding protein msba | SDE_RS02040 | Not Available | - | 477227 - 478987 | 64543.8 |
| branched-chain amino acid transaminase | SDE_RS02045 | Not Available | - | 479069 - 479998 | 34929.8 |
| bifunctional | SDE_RS02050 | Not Available | - | 480101 - 483040 | 110820.0 |
| pas domain s-box protein | SDE_RS02055 | Not Available | + | 483312 - 487139 | 142393.0 |
| methyl-accepting chemotaxis protein | SDE_RS02060 | Not Available | - | 487335 - 488834 | 54156.2 |
| sensor domain-containing diguanylate cyclase | SDE_RS02065 | Not Available | - | 489152 - 490111 | 36694.6 |
| histidine kinase | SDE_RS02070 | Not Available | - | 490145 - 490756 | 22261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.