Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3010 family protein | SDE_RS19395 | Not Available | - | 4699708 - 4700184 | 17323.2 |
| transglutaminase-like domain-containing protein | SDE_RS19400 | Not Available | + | 4700423 - 4701028 | 22251.3 |
| 16s rrna pseudouridine(516) synthase | SDE_RS19405 | Not Available | + | 4701025 - 4701774 | 28208.9 |
| duf1349 domain-containing protein | SDE_RS21630 | Not Available | + | 4701796 - 4702503 | 26297.3 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | SDE_RS21635 | Not Available | - | 4702607 - 4703284 | 25590.9 |
| atp-dependent dna helicase recg | SDE_RS19420 | Not Available | - | 4703452 - 4705539 | 76582.8 |
| hydrogen peroxide-inducible genes activator | SDE_RS19425 | Not Available | - | 4705546 - 4706472 | 33732.9 |
| sdr family oxidoreductase | SDE_RS19430 | Not Available | + | 4706520 - 4707410 | 32232.9 |
| aminoacyl-trna deacylase and hdod domain-containing protein | SDE_RS19435 | Not Available | + | 4707679 - 4709058 | 50599.5 |
| mipa/ompv family protein | SDE_RS19440 | Not Available | - | 4709191 - 4710015 | 30476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.