Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | SDE_RS19245 | Not Available | + | 4666419 - 4667285 | 32762.3 |
| hnh endonuclease | SDE_RS23150 | Not Available | + | 4667499 - 4669337 | 68424.8 |
| smi1/knr4 family protein | SDE_RS19255 | Not Available | + | 4669346 - 4669819 | 17716.5 |
| ywqj-related putative deaminase | SDE_RS19260 | Not Available | + | 4669888 - 4671072 | 42577.1 |
| hypothetical protein | SDE_RS19265 | Not Available | + | 4671074 - 4671949 | 33293.4 |
| hypothetical protein | SDE_RS19270 | Not Available | + | 4672076 - 4672339 | 10290.4 |
| deoxyribonuclease v | SDE_RS19275 | Not Available | - | 4672502 - 4673134 | 23107.1 |
| duf2075 domain-containing protein | SDE_RS19280 | Not Available | - | 4673285 - 4675258 | 73747.8 |
| hypothetical protein | SDE_RS23220 | Not Available | - | 4675567 - 4675869 | 11310.4 |
| glycosyl hydrolase | SDE_RS19285 | Not Available | + | 4675949 - 4677121 | 44023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.