Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme biosynthesis hemy n-terminal domain-containing protein | SDE_RS19145 | Not Available | - | 4645851 - 4647062 | 45984.0 |
| uroporphyrinogen-iii c-methyltransferase | SDE_RS19150 | Not Available | - | 4647059 - 4648543 | 54346.6 |
| uroporphyrinogen-iii synthase | SDE_RS19155 | Not Available | - | 4648623 - 4649495 | 31910.8 |
| hydroxymethylbilane synthase | SDE_RS19160 | Not Available | - | 4649482 - 4650408 | 33444.4 |
| lytr/algr family response regulator transcription factor | SDE_RS19165 | Not Available | - | 4650532 - 4651263 | 27272.9 |
| sensor histidine kinase | SDE_RS19170 | Not Available | - | 4651271 - 4652302 | 37485.9 |
| argininosuccinate lyase | SDE_RS19175 | Not Available | + | 4652644 - 4654047 | 52015.6 |
| exodeoxyribonuclease iii | SDE_RS19180 | Not Available | - | 4654239 - 4655024 | 30105.4 |
| orotate phosphoribosyltransferase | SDE_RS19185 | Not Available | + | 4655455 - 4656096 | 22875.4 |
| duf4124 domain-containing protein | SDE_RS19190 | Not Available | + | 4656187 - 4656837 | 24336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.