Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | SDE_RS17985 | Not Available | - | 4377415 - 4378515 | 39547.1 |
| sensor histidine kinase | SDE_RS17990 | Not Available | - | 4378609 - 4379883 | 46617.3 |
| response regulator transcription factor | SDE_RS17995 | Not Available | - | 4379873 - 4380613 | 27422.2 |
| gnat family n-acetyltransferase | SDE_RS18000 | Not Available | - | 4380686 - 4381213 | 19483.8 |
| ribonuclease hi | SDE_RS18005 | Not Available | - | 4381311 - 4381808 | 18532.4 |
| ykgj family cysteine cluster protein | SDE_RS18010 | Not Available | + | 4381871 - 4382302 | 16434.7 |
| arylesterase | SDE_RS18015 | Not Available | - | 4382355 - 4382999 | 23141.3 |
| abc transporter atp-binding protein | SDE_RS18020 | Not Available | + | 4383161 - 4383841 | 24626.5 |
| abc transporter permease | SDE_RS18025 | Not Available | + | 4383850 - 4386336 | 89969.8 |
| pectinesterase family protein | SDE_RS22965 | Not Available | + | 4386669 - 4389914 | 115083.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.