Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SDE_RS17175 | Not Available | - | 4190755 - 4191507 | 26596.8 |
| mfs transporter | SDE_RS17180 | Not Available | - | 4191571 - 4192845 | 46099.0 |
| cupin domain-containing protein | SDE_RS17185 | Not Available | - | 4192857 - 4193201 | 12489.9 |
| exo-oligoalginate lyase alg17 | SDE_RS17190 | Not Available | - | 4193326 - 4195536 | 81586.3 |
| polysaccharide lyase 6 family protein | SDE_RS17195 | Not Available | - | 4195553 - 4197835 | 83171.8 |
| polysaccharide lyase family 7 protein | SDE_RS17205 | Not Available | + | 4198361 - 4199392 | 37523.0 |
| fadr/gntr family transcriptional regulator | SDE_RS17210 | Not Available | + | 4199547 - 4200317 | 28866.3 |
| manganese efflux pump mntp family protein | SDE_RS17215 | Not Available | - | 4200366 - 4200911 | 18596.7 |
| chorismate--pyruvate lyase family protein | SDE_RS17220 | Not Available | - | 4200940 - 4201491 | 20378.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SDE_RS17225 | Not Available | + | 4201702 - 4202982 | 45521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.