Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosinase family protein | SDE_RS01670 | Not Available | + | 391275 - 393347 | 77744.0 |
| loda/goxa family ctq-dependent oxidase | SDE_RS01675 | Not Available | + | 393393 - 395696 | 86616.1 |
| nad(p)/fad-dependent oxidoreductase | SDE_RS01680 | Not Available | + | 395703 - 397151 | 54072.1 |
| hypothetical protein | SDE_RS01685 | Not Available | + | 397138 - 397782 | 23353.7 |
| dj-1/pfpi family protein | SDE_RS01690 | Not Available | + | 397816 - 398502 | 24657.4 |
| hypothetical protein | SDE_RS01695 | Not Available | - | 398574 - 398858 | 11202.3 |
| mannan-binding lectin | SDE_RS01700 | Not Available | - | 399174 - 400628 | 53339.6 |
| endo-1,4-beta-xylanase | SDE_RS01705 | Not Available | + | 401245 - 403242 | 74600.7 |
| helix-turn-helix domain-containing protein | SDE_RS01710 | Not Available | + | 403488 - 404639 | 44027.8 |
| glycoside hydrolase family 5 protein | SDE_RS01715 | Not Available | + | 404856 - 406211 | 49140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.